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<title><string language="fre"><![CDATA[Best Practices for Reproducible Research part 2]]></string></title>
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<string language="fre"><![CDATA[The aim of this tutorial is to sensibilize the audience to the
experiment and analysis reproducibility issue in particular in
computer science. I will present tools that help answering the
analysis problem and may also reveal useful for managing the
experimental process through notebooks.
More precisely, I will introduce the audience to the following tools:
R and ggplot2 that provide a standard, efficient and flexible
data management and graph generation mechanism. Although R is
quite cumbersome at first for computer scientists, it quickly
reveals an incredible asset compared to spreadsheets, gnuplot or
graphical libraries like matplotlib or tikz.
knitR is a tool that enables to integrate R commands within a
LaTeX or a Markdown document. It allows to fully automatize data
post-processing/analysis and figure generation down to their
integration to a report. Beyond the gain in term of ease of
generation, page layout, uniformity insurance, such integration
allows anyone to easily check what has been done during the
analysis and possibly to improve graphs or analysis.
I will explain how to use these tools with Rstudio, which is a
multi-platform and easy-to-use IDE for R. For example, using
R+Markdown (Rmd files) in Rstudio, it is extremely easy to
export the output result to Rpubs and hence make the result of
your research available to others in no more than two clicks.
I will also mention other alternatives such as org-mode and
babel or the ipython notebook that allow a day-to-day practice
of reproducible research in a somehow more fluent way than
knitR but is mainly a matter of taste.
Depending on the question of the audience, I can also help the
attendees analyzing some of their data and introduce them to the
basics of data analysis.]]></string></description>
<keyword><string language="fre"><![CDATA[high performance computing]]></string></keyword>
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<string language="fre"><![CDATA[Droits réservés à l'éditeur et aux auteurs. 
Document libre, dans le cadre de la licence Creative Commons (http://creativecommons.org/licenses/by-nd/2.0/fr/), citation de l'auteur obligatoire et interdiction de désassembler (paternité, pas de modification)]]></string>
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